Index

A | B | C | D | E | F | G | H | I | M | O | P | R | S | T | U | V

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A

accepted() (gensei.any_object.AnyObject method) AnyObject (class in gensei.any_object)

assert_() (in module gensei.base)

B

Box (class in gensei.box)

C

compute_approximate_surface() (gensei.ellipsoid.Ellipsoid method) Config (class in gensei.base) contains() (gensei.cylinder.Cylinder method) (gensei.ellipsoid.Ellipsoid method)

copy() (gensei.base.Object method) Cylinder (class in gensei.cylinder)

D

dict_from_keys_init() (in module gensei.base)

E

Ellipsoid (class in gensei.ellipsoid) EllipsoidIntersector (class in gensei.intersectors)

evaluate() (in module gensei.utils)

F

fd_close() (gensei.base.Object method) fd_open() (gensei.base.Object method) format_dict() (in module gensei.utils) format_intersection_statistics() (gensei.objects.Objects method) format_statistics() (gensei.objects.Objects method) from_conf() (gensei.any_object.AnyObject static method) (gensei.base.Config static method) (gensei.cylinder.Cylinder static method) (gensei.ellipsoid.Ellipsoid static method) (gensei.objects.Objects static method)

from_file() (gensei.base.Config static method)

G

generate_slices() (in module volume_slicer) gensei.any_object (module) gensei.base (module) gensei.box (module) gensei.cylinder (module) gensei.ellipsoid (module) gensei.geometry (module) gensei.getch (module) gensei.intersectors (module) gensei.objects (module) gensei.single_object (module) gensei.utils (module) get_aligned_bounding_box() (gensei.any_object.AnyObject method) (gensei.intersectors.EllipsoidIntersector method) get_area() (gensei.box.Box method) get_average_semiaxes() (in module gensei.geometry) get_circumscribed_ellipsoid() (gensei.cylinder.Cylinder method)

get_cylinder_shape() (in module gensei.geometry) get_dict() (gensei.base.Object method) get_intersector() (gensei.any_object.AnyObject method) get_origin_bounding_box() (gensei.any_object.AnyObject method) (gensei.intersectors.EllipsoidIntersector method) get_output_function() (gensei.base.Output method) get_output_prefix() (gensei.base.Output method) get_pixel_area() (gensei.box.Box method) get_pixel_sizes() (gensei.box.Box method) get_points() (gensei.box.Box method) get_radius() (gensei.cylinder.Cylinder method) (gensei.ellipsoid.Ellipsoid method) get_random() (in module gensei.utils) get_random_direction() (in module gensei.utils) get_sizes() (gensei.box.Box method) get_suffix() (in module gensei.utils)

H

has_intersection() (gensei.any_object.AnyObject method)

I

import_file() (in module gensei.base) init_counts() (gensei.objects.Objects method) init_intersection_counters() (gensei.any_object.AnyObject method) init_section_based_data() (gensei.objects.Objects method) init_trait() (gensei.base.Object method) Intersector (class in gensei.intersectors)

intersects() (gensei.any_object.AnyObject method) (gensei.intersectors.EllipsoidIntersector method) intersects_fast() (gensei.intersectors.Intersector method) is_sequence() (in module gensei.base) iter_segments() (gensei.intersectors.Intersector method)

M

main() (in module volume_slicer) make_axis_rotation_matrix() (in module gensei.geometry) make_rotation_matrix_hc() (in module gensei.geometry)

make_translation_matrix_hc() (in module gensei.geometry)

O

Object (class in gensei.base) Objects (class in gensei.objects) objects_from_dict() (gensei.base.Object static method) ordered_iteritems() (in module gensei.base)

Output (class in gensei.base) override() (gensei.base.Config method)

P

pause() (in module gensei.base) place_objects() (gensei.objects.Objects method)

prefix (gensei.base.Output attribute)

R

reduce_to_fit() (in module gensei.objects) report() (gensei.any_object.AnyObject method) (gensei.base.Object method) (gensei.objects.Objects method)

S

set_centre() (gensei.intersectors.Intersector method) (gensei.single_object.SingleObject method) set_conf() (gensei.any_object.AnyObject method) set_data() (gensei.intersectors.EllipsoidIntersector method) set_default_traits() (gensei.base.Object method) set_output() (gensei.base.Output method) set_output_prefix() (gensei.base.Output method)

setup_orientation() (gensei.any_object.AnyObject method) (gensei.single_object.SingleObject method) SingleObject (class in gensei.single_object) spause() (in module gensei.base) store_intersection() (gensei.any_object.AnyObject method)

T

transform_to_pixels() (in module gensei.geometry)

U

update_section_based_data() (gensei.objects.Objects method) update_stats() (gensei.any_object.AnyObject method)

V

volume_slicer (module)