Users guide

Command line usage:

$ python esofspy,py --help
Usage: esofspy.py [options] files file_out

Options:
  --version             show program's version number and exit
  -h, --help            show this help message and exit
  --surface             surface of histograms = counting + drawing  [default:
                        False]
  --histogram           histograms = counting + drawing  [default: False]
  --histogram-fraction  histograms_fraction = counting + drawing  [default:
                        False]
  --rose-orig           original rose of directions = counting + drawing
                        [default: False]
  --rose-scaled         original rose of directions = couting + drawing the
                        rose of directions scaled by suma of the lengths of
                        the objects in given directions  [default: False]
  --card-orient         cardinal directions = counting + drawing  [default:
                        False]
  --card-vectors        n-max vectors of cardinal directions = counting +
                        drawing [default: False]
  --one-file            add vectors of cardinal directions and/or isotropy
                        parameters on the end of the file [default: False]
  --n-max=int           number of the cardinal directions  [default: 3]
  --threshold=float     threshold fraction of cardinal directions  [default:
                        none]
  -s                    save all drawing pictures and text files with angles
                        of main objects' directions
  --prefix=prefix       prefix of output files  [default: none]
  --format=format       format of ouput files  [default: pdf]
  --skip-rows=int       number of rows to skip in histogram files [default: 0]
  --isotropy            evaluate the isotropy of the system [default: False]
  --calibration=float,float,float
                        calibration of images used for fractional and
                        ellipsoidal anisotropy evaluation [default: 0.180879,
                        0.180879, 6]
  --anisotropy          count fractional and ellipsoidal anisotropy of line
                        system [default: False]

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